Carnation DB

Dca3187.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
Repeat List (scaffold11124)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3187.1	30	220	323	36.22	191	56	2e-55
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	446	656	1717	12.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3187.1	87	167	323	9.28	81	38	1e-09
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	177	192	41.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11124	Augustus	mRNA	3697	7893	.	-	.	ID=Dca3187.1;Parent=Dca3187
scaffold11124	Augustus	exon	3697	3831	.	-	.	ID=Dca3187.1.exon1;Parent=Dca3187.1
scaffold11124	Augustus	exon	4189	4219	.	-	.	ID=Dca3187.1.exon2;Parent=Dca3187.1
scaffold11124	Augustus	exon	5797	5950	.	-	.	ID=Dca3187.1.exon3;Parent=Dca3187.1
scaffold11124	Augustus	exon	7178	7321	.	-	.	ID=Dca3187.1.exon4;Parent=Dca3187.1
scaffold11124	Augustus	exon	7386	7893	.	-	.	ID=Dca3187.1.exon5;Parent=Dca3187.1