Carnation DB

Dca31883.1

Annotation

19-exons
f-1
sp|F6H7A2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g00680#GO:0005524;GO:0003684;GO:0030983;GO:0045005;GO:0006298#3F2P0C
AT5G54090.1 | Symbols: | DNA mismatch repair protein MutS, type 2 | chr5:21948283-21952550 REVERSE LENGTH=796
Repeat List (scaffold322)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31883.1	52	832	832	55.04	781	58	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H7A2_VITVI	22	818	818	97.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31883.1	70	830	832	47.59	761	51	0
Target_name	Start	End	Length	Cov(%)
AT5G54090.1	50	794	796	93.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold322	Augustus	mRNA	132234	140227	.	+	.	ID=Dca31883.1;Parent=Dca31883
scaffold322	Augustus	exon	132234	132527	.	+	.	ID=Dca31883.1.exon1;Parent=Dca31883.1
scaffold322	Augustus	exon	132615	132743	.	+	.	ID=Dca31883.1.exon2;Parent=Dca31883.1
scaffold322	Augustus	exon	134292	134459	.	+	.	ID=Dca31883.1.exon3;Parent=Dca31883.1
scaffold322	Augustus	exon	134574	134657	.	+	.	ID=Dca31883.1.exon4;Parent=Dca31883.1
scaffold322	Augustus	exon	135849	135905	.	+	.	ID=Dca31883.1.exon5;Parent=Dca31883.1
scaffold322	Augustus	exon	135990	136072	.	+	.	ID=Dca31883.1.exon6;Parent=Dca31883.1
scaffold322	Augustus	exon	136351	136474	.	+	.	ID=Dca31883.1.exon7;Parent=Dca31883.1
scaffold322	Augustus	exon	136574	136633	.	+	.	ID=Dca31883.1.exon8;Parent=Dca31883.1
scaffold322	Augustus	exon	136980	137225	.	+	.	ID=Dca31883.1.exon9;Parent=Dca31883.1
scaffold322	Augustus	exon	137355	137438	.	+	.	ID=Dca31883.1.exon10;Parent=Dca31883.1
scaffold322	Augustus	exon	137520	137667	.	+	.	ID=Dca31883.1.exon11;Parent=Dca31883.1
scaffold322	Augustus	exon	137979	138106	.	+	.	ID=Dca31883.1.exon12;Parent=Dca31883.1
scaffold322	Augustus	exon	138555	138602	.	+	.	ID=Dca31883.1.exon13;Parent=Dca31883.1
scaffold322	Augustus	exon	138843	138973	.	+	.	ID=Dca31883.1.exon14;Parent=Dca31883.1
scaffold322	Augustus	exon	139107	139189	.	+	.	ID=Dca31883.1.exon15;Parent=Dca31883.1
scaffold322	Augustus	exon	139336	139439	.	+	.	ID=Dca31883.1.exon16;Parent=Dca31883.1
scaffold322	Augustus	exon	139510	139580	.	+	.	ID=Dca31883.1.exon17;Parent=Dca31883.1
scaffold322	Augustus	exon	139687	139979	.	+	.	ID=Dca31883.1.exon18;Parent=Dca31883.1
scaffold322	Augustus	exon	140064	140227	.	+	.	ID=Dca31883.1.exon19;Parent=Dca31883.1