Dca31896.1
Annotation
- 4-exons
- f-1
- sp|B9I7B3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570757#unknown#0F0P0C
- sp|G7KXH6_MEDTR#F-box/LRR-repeat protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g112570#unknown#0F0P0C
- Repeat List (scaffold3220)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31896.1 |
38 |
171 |
206 |
20.38 |
134 |
31 |
1e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I7B3_POPTR |
442 |
572 |
646 |
20.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31896.1 |
11 |
203 |
206 |
42.71 |
193 |
41 |
8e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G27920.1 |
205 |
420 |
642 |
33.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3220 |
Augustus |
mRNA |
19100 |
20422 |
. |
+ |
. |
ID=Dca31896.1;Parent=Dca31896 |
| scaffold3220 |
Augustus |
exon |
19100 |
19144 |
. |
+ |
. |
ID=Dca31896.1.exon1;Parent=Dca31896.1 |
| scaffold3220 |
Augustus |
exon |
19548 |
19673 |
. |
+ |
. |
ID=Dca31896.1.exon2;Parent=Dca31896.1 |
| scaffold3220 |
Augustus |
exon |
19803 |
19907 |
. |
+ |
. |
ID=Dca31896.1.exon3;Parent=Dca31896.1 |
| scaffold3220 |
Augustus |
exon |
20078 |
20422 |
. |
+ |
. |
ID=Dca31896.1.exon4;Parent=Dca31896.1 |
