Carnation DB

Dca31966.1

Annotation

8-exons
f-1
sp|D7TMC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g04000#GO:0009982;GO:0003723;GO:0001522#2F1P0C
AT3G52260.3 | Symbols: | Pseudouridine synthase family protein | chr3:19383452-19386440 REVERSE LENGTH=416
Repeat List (scaffold323)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31966.1	35	243	249	63.85	209	76	1e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7TMC1_VITVI	82	288	347	59.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31966.1	16	249	249	59.83	234	63	5e-79
Target_name	Start	End	Length	Cov(%)
AT3G52260.3	95	327	416	56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold323	Augustus	mRNA	163640	166143	.	-	.	ID=Dca31966.1;Parent=Dca31966
scaffold323	Augustus	exon	163640	163735	.	-	.	ID=Dca31966.1.exon1;Parent=Dca31966.1
scaffold323	Augustus	exon	163834	163901	.	-	.	ID=Dca31966.1.exon2;Parent=Dca31966.1
scaffold323	Augustus	exon	164119	164194	.	-	.	ID=Dca31966.1.exon3;Parent=Dca31966.1
scaffold323	Augustus	exon	164361	164436	.	-	.	ID=Dca31966.1.exon4;Parent=Dca31966.1
scaffold323	Augustus	exon	164534	164636	.	-	.	ID=Dca31966.1.exon5;Parent=Dca31966.1
scaffold323	Augustus	exon	164923	165088	.	-	.	ID=Dca31966.1.exon6;Parent=Dca31966.1
scaffold323	Augustus	exon	165866	165929	.	-	.	ID=Dca31966.1.exon7;Parent=Dca31966.1
scaffold323	Augustus	exon	166043	166143	.	-	.	ID=Dca31966.1.exon8;Parent=Dca31966.1