Carnation DB

Dca32008.1

Annotation

6-exons
f-1
sp|D7T103_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0085g01090#GO:0005643;GO:0006606#0F1P1C
Os02t0741500-01 Ribbon-helix-helix domain containing protein.
Repeat List (scaffold3236)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32008.1	1	2068	2092	55.54	2068	55	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T103_VITVI	1	2066	2088	98.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32008.1	1	2064	2092	48.32	2064	47	0
Target_name	Start	End	Length	Cov(%)
AT1G79280.2	1	2085	2115	98.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3236	Augustus	mRNA	6047	14135	.	+	.	ID=Dca32008.1;Parent=Dca32008
scaffold3236	Augustus	exon	6047	6358	.	+	.	ID=Dca32008.1.exon1;Parent=Dca32008.1
scaffold3236	Augustus	exon	6955	7822	.	+	.	ID=Dca32008.1.exon2;Parent=Dca32008.1
scaffold3236	Augustus	exon	8143	10625	.	+	.	ID=Dca32008.1.exon3;Parent=Dca32008.1
scaffold3236	Augustus	exon	10725	13266	.	+	.	ID=Dca32008.1.exon4;Parent=Dca32008.1
scaffold3236	Augustus	exon	13960	14007	.	+	.	ID=Dca32008.1.exon5;Parent=Dca32008.1
scaffold3236	Augus-PASA	exon	14110	14135	.	+	.	ID=Dca32008.1.exon6;Parent=Dca32008.1