Dca32488.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3297)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32488.1 |
1 |
213 |
217 |
64.51 |
213 |
55 |
9e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
895 |
896 |
28.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32488.1 |
37 |
200 |
217 |
28.11 |
164 |
30 |
8e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1382 |
1401 |
14.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3297 |
Augustus |
mRNA |
54170 |
54951 |
. |
+ |
. |
ID=Dca32488.1;Parent=Dca32488 |
| scaffold3297 |
Augustus |
exon |
54170 |
54494 |
. |
+ |
. |
ID=Dca32488.1.exon1;Parent=Dca32488.1 |
| scaffold3297 |
Augustus |
exon |
54623 |
54951 |
. |
+ |
. |
ID=Dca32488.1.exon2;Parent=Dca32488.1 |
