Carnation DB

Dca32500.1

Annotation

9-exons
f-1
sp|C0PS92_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0005737;GO:0005524;GO:0017111;GO:0030163#2F1P1C
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Repeat List (scaffold3299)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32500.1	7	402	402	92.28	396	94	0
Target_name	Start	End	Length	Cov(%)
sp\|C0PS92_PICSI	38	433	433	91.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32500.1	11	402	402	91.54	392	94	0
Target_name	Start	End	Length	Cov(%)
AT5G19990.1	28	419	419	93.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3299	Augus-PASA	mRNA	7472	12634	.	-	.	ID=Dca32500.1;Parent=Dca32500
scaffold3299	Augus-PASA	exon	7472	7612	.	-	.	ID=Dca32500.1.exon1;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	7995	8105	.	-	.	ID=Dca32500.1.exon2;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	8262	8360	.	-	.	ID=Dca32500.1.exon3;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	8493	8649	.	-	.	ID=Dca32500.1.exon4;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	9427	9590	.	-	.	ID=Dca32500.1.exon5;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	9712	9774	.	-	.	ID=Dca32500.1.exon6;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	9883	10107	.	-	.	ID=Dca32500.1.exon7;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	10229	10326	.	-	.	ID=Dca32500.1.exon8;Parent=Dca32500.1
scaffold3299	Augus-PASA	exon	12484	12634	.	-	.	ID=Dca32500.1.exon9;Parent=Dca32500.1