Carnation DB

Dca32735.1

Annotation

5-exons
f-2
sp|F6GXI3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00550#GO:0003697#1F0P0C
sp|Q58J68_SOLTU#Mitochondrial SBP40#Solanum tuberosum (Potato)#unknown#GO:0003697#1F0P0C
Repeat List (scaffold332)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32735.1	1	114	233	17.59	114	36	3e-11
Target_name	Start	End	Length	Cov(%)
sp\|F6GXI3_VITVI	149	259	377	29.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32735.1	91	205	233	20.6	115	42	3e-20
Target_name	Start	End	Length	Cov(%)
AT4G20010.1	85	198	371	30.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold332	Augus-PASA	mRNA	57646	60146	.	-	.	ID=Dca32735.1;Parent=Dca32735
scaffold332	Augus-PASA	exon	57646	57680	.	-	.	ID=Dca32735.1.exon1;Parent=Dca32735.1
scaffold332	Augus-PASA	exon	57818	57908	.	-	.	ID=Dca32735.1.exon2;Parent=Dca32735.1
scaffold332	Augus-PASA	exon	58140	58278	.	-	.	ID=Dca32735.1.exon3;Parent=Dca32735.1
scaffold332	Augus-PASA	exon	59479	59774	.	-	.	ID=Dca32735.1.exon4;Parent=Dca32735.1
scaffold332	Augustus	exon	60005	60146	.	-	.	ID=Dca32735.1.exon5;Parent=Dca32735.1