Carnation DB

Dca32736.1

Annotation

9-exons
f-1
sp|D7L1X8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_480822#GO:0016021;GO:0005524;GO:0043682;GO:0046872;GO:0006754#3F1P1C
AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | chr4:14720253-14724577 REVERSE LENGTH=951
Repeat List (scaffold332)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32736.1	11	770	961	47.65	760	58	0
Target_name	Start	End	Length	Cov(%)
sp\|D7L1X8_ARALL	73	871	1175	68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32736.1	9	961	961	51.61	953	52	0
Target_name	Start	End	Length	Cov(%)
AT4G30110.1	61	951	951	93.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold332	Augustus	mRNA	112717	118010	.	+	.	ID=Dca32736.1;Parent=Dca32736
scaffold332	Augustus	exon	112717	112744	.	+	.	ID=Dca32736.1.exon1;Parent=Dca32736.1
scaffold332	Augustus	exon	114569	114826	.	+	.	ID=Dca32736.1.exon2;Parent=Dca32736.1
scaffold332	Augustus	exon	114921	115018	.	+	.	ID=Dca32736.1.exon3;Parent=Dca32736.1
scaffold332	Augustus	exon	115103	115358	.	+	.	ID=Dca32736.1.exon4;Parent=Dca32736.1
scaffold332	Augustus	exon	115445	115582	.	+	.	ID=Dca32736.1.exon5;Parent=Dca32736.1
scaffold332	Augustus	exon	115657	115984	.	+	.	ID=Dca32736.1.exon6;Parent=Dca32736.1
scaffold332	Augustus	exon	116070	116272	.	+	.	ID=Dca32736.1.exon7;Parent=Dca32736.1
scaffold332	Augustus	exon	116364	116560	.	+	.	ID=Dca32736.1.exon8;Parent=Dca32736.1
scaffold332	Augustus	exon	116631	118010	.	+	.	ID=Dca32736.1.exon9;Parent=Dca32736.1