Carnation DB

Dca32737.1

Annotation

8-exons
f-1
sp|A9PFA8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827713#GO:0008097;GO:0003735;GO:0006412#2F1P0C
AT5G39740.1 | Symbols: OLI7, RPL5B | ribosomal protein L5 B | chr5:15903365-15905185 FORWARD LENGTH=301
Repeat List (scaffold332)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32737.1	1	299	303	86.13	299	88	9e-154
Target_name	Start	End	Length	Cov(%)
sp\|A9PFA8_POPTR	2	297	297	99.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32737.1	1	291	303	77.88	291	82	1e-142
Target_name	Start	End	Length	Cov(%)
AT5G39740.1	2	292	301	96.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold332	Augustus	mRNA	124592	127131	.	+	.	ID=Dca32737.1;Parent=Dca32737
scaffold332	Augustus	exon	124592	124661	.	+	.	ID=Dca32737.1.exon1;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	124759	124850	.	+	.	ID=Dca32737.1.exon2;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	125093	125219	.	+	.	ID=Dca32737.1.exon3;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	125337	125416	.	+	.	ID=Dca32737.1.exon4;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	125494	125610	.	+	.	ID=Dca32737.1.exon5;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	125978	126112	.	+	.	ID=Dca32737.1.exon6;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	126194	126363	.	+	.	ID=Dca32737.1.exon7;Parent=Dca32737.1
scaffold332	Augus-PASA	exon	127011	127131	.	+	.	ID=Dca32737.1.exon8;Parent=Dca32737.1