Carnation DB

Dca32848.1

Annotation

18-exons
f-1
sp|B9SDP7_RICCO#Transferrin receptor protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0423040#GO:0032440;GO:0008233;GO:0004872;GO:0006508#3F1P0C
Repeat List (scaffold3334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32848.1	695	1000	1001	19.18	306	63	4e-112
Target_name	Start	End	Length	Cov(%)
sp\|B9SDP7_RICCO	402	708	709	43.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32848.1	678	1000	1001	17.98	323	54	4e-99
Target_name	Start	End	Length	Cov(%)
AT3G54720.1	375	704	705	46.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3334	Augustus	mRNA	20847	28858	.	-	.	ID=Dca32848.1;Parent=Dca32848
scaffold3334	Augustus	exon	20847	21020	.	-	.	ID=Dca32848.1.exon1;Parent=Dca32848.1
scaffold3334	Augustus	exon	21202	21336	.	-	.	ID=Dca32848.1.exon2;Parent=Dca32848.1
scaffold3334	Augustus	exon	21433	21546	.	-	.	ID=Dca32848.1.exon3;Parent=Dca32848.1
scaffold3334	Augustus	exon	22015	22103	.	-	.	ID=Dca32848.1.exon4;Parent=Dca32848.1
scaffold3334	Augustus	exon	22213	22296	.	-	.	ID=Dca32848.1.exon5;Parent=Dca32848.1
scaffold3334	Augustus	exon	22571	22658	.	-	.	ID=Dca32848.1.exon6;Parent=Dca32848.1
scaffold3334	Augustus	exon	22911	22979	.	-	.	ID=Dca32848.1.exon7;Parent=Dca32848.1
scaffold3334	Augustus	exon	23118	23270	.	-	.	ID=Dca32848.1.exon8;Parent=Dca32848.1
scaffold3334	Augustus	exon	23750	23890	.	-	.	ID=Dca32848.1.exon9;Parent=Dca32848.1
scaffold3334	Augustus	exon	24084	24218	.	-	.	ID=Dca32848.1.exon10;Parent=Dca32848.1
scaffold3334	Augustus	exon	24315	24428	.	-	.	ID=Dca32848.1.exon11;Parent=Dca32848.1
scaffold3334	Augustus	exon	24613	24701	.	-	.	ID=Dca32848.1.exon12;Parent=Dca32848.1
scaffold3334	Augustus	exon	24813	24896	.	-	.	ID=Dca32848.1.exon13;Parent=Dca32848.1
scaffold3334	Augustus	exon	25176	25263	.	-	.	ID=Dca32848.1.exon14;Parent=Dca32848.1
scaffold3334	Augustus	exon	25517	25585	.	-	.	ID=Dca32848.1.exon15;Parent=Dca32848.1
scaffold3334	Augustus	exon	25724	25876	.	-	.	ID=Dca32848.1.exon16;Parent=Dca32848.1
scaffold3334	Augustus	exon	27026	27268	.	-	.	ID=Dca32848.1.exon17;Parent=Dca32848.1
scaffold3334	Augustus	exon	27875	28858	.	-	.	ID=Dca32848.1.exon18;Parent=Dca32848.1
scaffold3334	Augustus	mRNA	20847	28858	.	-	.	ID=Dca32848.2;Parent=Dca32848
scaffold3334	Augustus	exon	20847	21020	.	-	.	ID=Dca32848.2.exon1;Parent=Dca32848.2
scaffold3334	Augustus	exon	21202	21336	.	-	.	ID=Dca32848.2.exon2;Parent=Dca32848.2
scaffold3334	Augustus	exon	21433	21546	.	-	.	ID=Dca32848.2.exon3;Parent=Dca32848.2
scaffold3334	Augustus	exon	21731	21819	.	-	.	ID=Dca32848.2.exon4;Parent=Dca32848.2
scaffold3334	Augustus	exon	22213	22296	.	-	.	ID=Dca32848.2.exon5;Parent=Dca32848.2
scaffold3334	Augustus	exon	22571	22658	.	-	.	ID=Dca32848.2.exon6;Parent=Dca32848.2
scaffold3334	Augustus	exon	22911	22979	.	-	.	ID=Dca32848.2.exon7;Parent=Dca32848.2
scaffold3334	Augustus	exon	23118	23270	.	-	.	ID=Dca32848.2.exon8;Parent=Dca32848.2
scaffold3334	Augustus	exon	23750	23890	.	-	.	ID=Dca32848.2.exon9;Parent=Dca32848.2
scaffold3334	Augustus	exon	24084	24218	.	-	.	ID=Dca32848.2.exon10;Parent=Dca32848.2
scaffold3334	Augustus	exon	24315	24428	.	-	.	ID=Dca32848.2.exon11;Parent=Dca32848.2
scaffold3334	Augustus	exon	24613	24701	.	-	.	ID=Dca32848.2.exon12;Parent=Dca32848.2
scaffold3334	Augustus	exon	24813	24896	.	-	.	ID=Dca32848.2.exon13;Parent=Dca32848.2
scaffold3334	Augustus	exon	25176	25263	.	-	.	ID=Dca32848.2.exon14;Parent=Dca32848.2
scaffold3334	Augustus	exon	25517	25585	.	-	.	ID=Dca32848.2.exon15;Parent=Dca32848.2
scaffold3334	Augustus	exon	25724	25876	.	-	.	ID=Dca32848.2.exon16;Parent=Dca32848.2
scaffold3334	Augustus	exon	27026	27268	.	-	.	ID=Dca32848.2.exon17;Parent=Dca32848.2
scaffold3334	Augustus	exon	27875	28858	.	-	.	ID=Dca32848.2.exon18;Parent=Dca32848.2