Carnation DB

Dca32884.1

Annotation

9-exons
f-1
sp|B9GHB4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_815675#GO:0000166;GO:0003723#2F0P0C
sp|Q9M549_CUCSA#Poly(A)-binding protein#Cucumis sativus (Cucumber)#unknown#GO:0000166;GO:0003723#2F0P0C
Repeat List (scaffold334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32884.1	119	316	549	12.02	198	33	2e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9GHB4_POPTR	9	194	644	28.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32884.1	39	343	549	19.3	305	35	6e-43
Target_name	Start	End	Length	Cov(%)
Os08t0314800-02	38	327	661	43.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold334	Augustus	mRNA	34425	37422	.	-	.	ID=Dca32884.1;Parent=Dca32884
scaffold334	Augustus	exon	34425	34646	.	-	.	ID=Dca32884.1.exon1;Parent=Dca32884.1
scaffold334	Augustus	exon	34724	34930	.	-	.	ID=Dca32884.1.exon2;Parent=Dca32884.1
scaffold334	Augustus	exon	35030	35158	.	-	.	ID=Dca32884.1.exon3;Parent=Dca32884.1
scaffold334	Augustus	exon	35269	35397	.	-	.	ID=Dca32884.1.exon4;Parent=Dca32884.1
scaffold334	Augustus	exon	35488	35577	.	-	.	ID=Dca32884.1.exon5;Parent=Dca32884.1
scaffold334	Augustus	exon	35657	35734	.	-	.	ID=Dca32884.1.exon6;Parent=Dca32884.1
scaffold334	Augustus	exon	35823	36482	.	-	.	ID=Dca32884.1.exon7;Parent=Dca32884.1
scaffold334	Augustus	exon	36594	36712	.	-	.	ID=Dca32884.1.exon8;Parent=Dca32884.1
scaffold334	Augustus	exon	37407	37422	.	-	.	ID=Dca32884.1.exon9;Parent=Dca32884.1