Carnation DB

Dca32885.1

Annotation

10-exons
f-1
sp|D7UBM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0103g00120#GO:0005737;GO:0005524;GO:0000287;GO:0004826;GO:0000049;GO:0006432;GO:0008033#4F2P1C
AT3G58140.1 | Symbols: | phenylalanyl-tRNA synthetase class IIc family protein | chr3:21529988-21532386 REVERSE LENGTH=429
Repeat List (scaffold334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32885.1	43	425	425	74.82	383	84	0
Target_name	Start	End	Length	Cov(%)
sp\|D7UBM0_VITVI	46	427	427	89.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32885.1	41	425	425	71.76	385	79	0
Target_name	Start	End	Length	Cov(%)
AT3G58140.1	41	429	429	90.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold334	Augus-PASA	mRNA	42162	45637	.	+	.	ID=Dca32885.1;Parent=Dca32885
scaffold334	Augus-PASA	exon	42162	42351	.	+	.	ID=Dca32885.1.exon1;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	43527	43717	.	+	.	ID=Dca32885.1.exon2;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	43821	44027	.	+	.	ID=Dca32885.1.exon3;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	44225	44342	.	+	.	ID=Dca32885.1.exon4;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	44507	44583	.	+	.	ID=Dca32885.1.exon5;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	44686	44865	.	+	.	ID=Dca32885.1.exon6;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	44969	45013	.	+	.	ID=Dca32885.1.exon7;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	45119	45223	.	+	.	ID=Dca32885.1.exon8;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	45387	45500	.	+	.	ID=Dca32885.1.exon9;Parent=Dca32885.1
scaffold334	Augus-PASA	exon	45587	45637	.	+	.	ID=Dca32885.1.exon10;Parent=Dca32885.1