Carnation DB

Dca32892.1

Annotation

7-exons
f-1
sp|B9H3J8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_648231#GO:0016021#0F0P1C
Repeat List (scaffold334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32892.1	8	73	77	37.66	66	44	4e-06
Target_name	Start	End	Length	Cov(%)
sp\|A9NKA2_PICSI	1	66	66	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32892.1	12	593	593	83.3	582	85	0
Target_name	Start	End	Length	Cov(%)
AT2G01970.1	8	592	592	98.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold334	Augustus	mRNA	70892	75796	.	-	.	ID=Dca32892.1;Parent=Dca32892
scaffold334	Augustus	exon	70892	71111	.	-	.	ID=Dca32892.1.exon1;Parent=Dca32892.1
scaffold334	Augustus	exon	71304	71788	.	-	.	ID=Dca32892.1.exon2;Parent=Dca32892.1
scaffold334	Augustus	exon	72226	72382	.	-	.	ID=Dca32892.1.exon3;Parent=Dca32892.1
scaffold334	Augustus	exon	72473	72610	.	-	.	ID=Dca32892.1.exon4;Parent=Dca32892.1
scaffold334	Augustus	exon	72734	73319	.	-	.	ID=Dca32892.1.exon5;Parent=Dca32892.1
scaffold334	Augustus	exon	73914	73954	.	-	.	ID=Dca32892.1.exon6;Parent=Dca32892.1
scaffold334	Augustus	exon	75642	75796	.	-	.	ID=Dca32892.1.exon7;Parent=Dca32892.1