Dca33173.1
Annotation
- 3-exons
- f-1
- sp|B9N446_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_581635#GO:0016020#0F0P1C
- sp|B9RFN0_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1436050#GO:0016020#0F0P1C
- Repeat List (scaffold3380)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33173.1 |
1 |
99 |
167 |
40.71 |
99 |
57 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N446_POPTR |
1 |
120 |
367 |
32.69 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33173.1 |
1 |
109 |
167 |
40.11 |
109 |
47 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G09380.1 |
1 |
144 |
374 |
38.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3380 |
Augustus |
mRNA |
23200 |
28256 |
. |
- |
. |
ID=Dca33173.1;Parent=Dca33173 |
| scaffold3380 |
Augustus |
exon |
23200 |
23407 |
. |
- |
. |
ID=Dca33173.1.exon1;Parent=Dca33173.1 |
| scaffold3380 |
Augustus |
exon |
25572 |
25688 |
. |
- |
. |
ID=Dca33173.1.exon2;Parent=Dca33173.1 |
| scaffold3380 |
Augustus |
exon |
28078 |
28256 |
. |
- |
. |
ID=Dca33173.1.exon3;Parent=Dca33173.1 |
