Carnation DB

Dca33285.1

Annotation

7-exons
f-1
sp|F6GTD8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05140#GO:0016021;GO:0004252#1F0P1C
AT1G18600.1 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12 | chr1:6400647-6402587 FORWARD LENGTH=336
Repeat List (scaffold34)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33285.1	40	233	239	54.81	194	63	2e-71
Target_name	Start	End	Length	Cov(%)
sp\|F6GTD8_VITVI	124	331	333	62.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33285.1	12	239	239	56.06	228	56	2e-65
Target_name	Start	End	Length	Cov(%)
AT1G18600.1	100	336	336	70.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold34	Augustus	mRNA	25324	28361	.	+	.	ID=Dca33285.1;Parent=Dca33285
scaffold34	Augustus	exon	25324	25442	.	+	.	ID=Dca33285.1.exon1;Parent=Dca33285.1
scaffold34	Augustus	exon	25703	25823	.	+	.	ID=Dca33285.1.exon2;Parent=Dca33285.1
scaffold34	Augustus	exon	25988	26107	.	+	.	ID=Dca33285.1.exon3;Parent=Dca33285.1
scaffold34	Augustus	exon	26353	26463	.	+	.	ID=Dca33285.1.exon4;Parent=Dca33285.1
scaffold34	Augustus	exon	26790	26834	.	+	.	ID=Dca33285.1.exon5;Parent=Dca33285.1
scaffold34	Augustus	exon	27884	27988	.	+	.	ID=Dca33285.1.exon6;Parent=Dca33285.1
scaffold34	Augustus	exon	28263	28361	.	+	.	ID=Dca33285.1.exon7;Parent=Dca33285.1