Carnation DB

Dca33286.1

Annotation

8-exons
f-1
sp|F6GTD8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05140#GO:0016021;GO:0004252#1F0P1C
AT1G18600.1 | Symbols: ATRBL12, RBL12 | RHOMBOID-like protein 12 | chr1:6400647-6402587 FORWARD LENGTH=336
Repeat List (scaffold34)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33286.1	2	237	238	55.88	236	56	9e-65
Target_name	Start	End	Length	Cov(%)
sp\|F6GTD8_VITVI	102	333	333	69.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33286.1	4	237	238	52.1	234	53	2e-61
Target_name	Start	End	Length	Cov(%)
AT1G18600.1	103	336	336	69.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold34	Augustus	mRNA	29754	35061	.	+	.	ID=Dca33286.1;Parent=Dca33286
scaffold34	Augustus	exon	29754	29818	.	+	.	ID=Dca33286.1.exon1;Parent=Dca33286.1
scaffold34	Augustus	exon	33227	33347	.	+	.	ID=Dca33286.1.exon2;Parent=Dca33286.1
scaffold34	Augustus	exon	33459	33578	.	+	.	ID=Dca33286.1.exon3;Parent=Dca33286.1
scaffold34	Augustus	exon	33874	33993	.	+	.	ID=Dca33286.1.exon4;Parent=Dca33286.1
scaffold34	Augustus	exon	34273	34317	.	+	.	ID=Dca33286.1.exon5;Parent=Dca33286.1
scaffold34	Augustus	exon	34593	34697	.	+	.	ID=Dca33286.1.exon6;Parent=Dca33286.1
scaffold34	Augustus	exon	34788	34829	.	+	.	ID=Dca33286.1.exon7;Parent=Dca33286.1
scaffold34	Augustus	exon	34963	35061	.	+	.	ID=Dca33286.1.exon8;Parent=Dca33286.1