Dca33287.1
Annotation
- 2-exons
- f-1
- sp|Q2QXX8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g04550#unknown#0F0P0C
- Repeat List (scaffold34)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33287.1 |
99 |
139 |
140 |
24.28 |
41 |
83 |
8e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QXX8_ORYSJ |
120 |
160 |
256 |
16.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33287.1 |
99 |
140 |
140 |
16.42 |
42 |
55 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
468 |
509 |
1262 |
3.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold34 |
Augustus |
mRNA |
36032 |
36862 |
. |
- |
. |
ID=Dca33287.1;Parent=Dca33287 |
| scaffold34 |
Augustus |
exon |
36032 |
36159 |
. |
- |
. |
ID=Dca33287.1.exon1;Parent=Dca33287.1 |
| scaffold34 |
Augustus |
exon |
36568 |
36862 |
. |
- |
. |
ID=Dca33287.1.exon2;Parent=Dca33287.1 |
