Carnation DB

Dca33350.1

Annotation

5-exons
f-1
sp|B9HPN4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1085904#GO:0016021;GO:0022891#1F0P1C
Repeat List (scaffold3400)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33350.1	1	729	738	73.03	729	74	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HPN4_POPTR	1	727	740	98.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33350.1	1	738	738	71.54	738	71	0
Target_name	Start	End	Length	Cov(%)
Os10t0539900-01	1	739	741	99.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3400	Augustus	mRNA	20449	23785	.	-	.	ID=Dca33350.1;Parent=Dca33350
scaffold3400	Augustus	exon	20449	20881	.	-	.	ID=Dca33350.1.exon1;Parent=Dca33350.1
scaffold3400	Augustus	exon	20968	21155	.	-	.	ID=Dca33350.1.exon2;Parent=Dca33350.1
scaffold3400	Augustus	exon	21418	22367	.	-	.	ID=Dca33350.1.exon3;Parent=Dca33350.1
scaffold3400	Augustus	exon	22634	23200	.	-	.	ID=Dca33350.1.exon4;Parent=Dca33350.1
scaffold3400	Augustus	exon	23707	23785	.	-	.	ID=Dca33350.1.exon5;Parent=Dca33350.1