Dca3353.1
Annotation
- 3-exons
- f-3
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold11195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3353.1 |
36 |
363 |
392 |
32.39 |
328 |
33 |
2e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
394 |
1501 |
25.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3353.1 |
57 |
228 |
392 |
12.75 |
172 |
30 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11195 |
Augustus |
mRNA |
3466 |
6300 |
. |
+ |
. |
ID=Dca3353.1;Parent=Dca3353 |
| scaffold11195 |
Augustus |
exon |
3466 |
3552 |
. |
+ |
. |
ID=Dca3353.1.exon1;Parent=Dca3353.1 |
| scaffold11195 |
Augustus |
exon |
5130 |
5890 |
. |
+ |
. |
ID=Dca3353.1.exon2;Parent=Dca3353.1 |
| scaffold11195 |
Augustus |
exon |
5968 |
6300 |
. |
+ |
. |
ID=Dca3353.1.exon3;Parent=Dca3353.1 |
