Dca33554.1
Annotation
- 3-exons
- f-1
- sp|B9HY02_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_885455#GO:0033897;GO:0003723#2F0P0C
- AT2G02990.1 | Symbols: RNS1, ATRNS1 | ribonuclease 1 | chr2:873714-874667 FORWARD LENGTH=230
- Repeat List (scaffold3427)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33554.1 |
31 |
231 |
231 |
48.05 |
201 |
55 |
1e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HY02_POPTR |
25 |
226 |
226 |
89.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33554.1 |
12 |
231 |
231 |
46.32 |
220 |
49 |
6e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G02990.1 |
10 |
230 |
230 |
96.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3427 |
Augustus |
mRNA |
22029 |
26549 |
. |
- |
. |
ID=Dca33554.1;Parent=Dca33554 |
| scaffold3427 |
Augustus |
exon |
22029 |
22448 |
. |
- |
. |
ID=Dca33554.1.exon1;Parent=Dca33554.1 |
| scaffold3427 |
Augustus |
exon |
22745 |
22900 |
. |
- |
. |
ID=Dca33554.1.exon2;Parent=Dca33554.1 |
| scaffold3427 |
Augustus |
exon |
26430 |
26549 |
. |
- |
. |
ID=Dca33554.1.exon3;Parent=Dca33554.1 |
