Carnation DB

Dca33727.1

Annotation

5-exons
f-1
sp|A5B6Y5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008801#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold3451)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33727.1	296	472	1281	4.37	177	31	6e-19
Target_name	Start	End	Length	Cov(%)
sp\|A5B6Y5_VITVI	120	300	2318	7.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33727.1	4	173	1281	4.05	170	31	4e-19
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	299	467	707	23.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3451	Augustus	mRNA	984	9894	.	+	.	ID=Dca33727.1;Parent=Dca33727
scaffold3451	Augustus	exon	984	1475	.	+	.	ID=Dca33727.1.exon1;Parent=Dca33727.1
scaffold3451	Augustus	exon	5825	6733	.	+	.	ID=Dca33727.1.exon2;Parent=Dca33727.1
scaffold3451	Augustus	exon	7019	7898	.	+	.	ID=Dca33727.1.exon3;Parent=Dca33727.1
scaffold3451	Augustus	exon	7983	8961	.	+	.	ID=Dca33727.1.exon4;Parent=Dca33727.1
scaffold3451	Augustus	exon	9309	9894	.	+	.	ID=Dca33727.1.exon5;Parent=Dca33727.1