Carnation DB

Dca33870.1

Annotation

12-exons
f-1
sp|F6HNU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02280#unknown#0F0P0C
sp|B9SE02_RICCO#Serine/threonine-protein kinase Nek8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1481460#GO:0016301#1F0P0C
Repeat List (scaffold3473)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33870.1	230	379	546	10.07	150	31	7e-10
Target_name	Start	End	Length	Cov(%)
sp\|F6HNU1_VITVI	305	480	484	36.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33870.1	231	378	546	9.89	148	31	7e-11
Target_name	Start	End	Length	Cov(%)
AT3G55580.1	310	483	488	35.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3473	Augustus	mRNA	6697	12575	.	-	.	ID=Dca33870.1;Parent=Dca33870
scaffold3473	Augustus	exon	6697	6926	.	-	.	ID=Dca33870.1.exon1;Parent=Dca33870.1
scaffold3473	Augustus	exon	7062	7128	.	-	.	ID=Dca33870.1.exon2;Parent=Dca33870.1
scaffold3473	Augustus	exon	7784	7827	.	-	.	ID=Dca33870.1.exon3;Parent=Dca33870.1
scaffold3473	Augustus	exon	8019	8109	.	-	.	ID=Dca33870.1.exon4;Parent=Dca33870.1
scaffold3473	Augustus	exon	8211	8393	.	-	.	ID=Dca33870.1.exon5;Parent=Dca33870.1
scaffold3473	Augustus	exon	9386	9429	.	-	.	ID=Dca33870.1.exon6;Parent=Dca33870.1
scaffold3473	Augustus	exon	9608	9844	.	-	.	ID=Dca33870.1.exon7;Parent=Dca33870.1
scaffold3473	Augustus	exon	10280	10516	.	-	.	ID=Dca33870.1.exon8;Parent=Dca33870.1
scaffold3473	Augustus	exon	10607	10738	.	-	.	ID=Dca33870.1.exon9;Parent=Dca33870.1
scaffold3473	Augustus	exon	11132	11216	.	-	.	ID=Dca33870.1.exon10;Parent=Dca33870.1
scaffold3473	Augustus	exon	11322	11395	.	-	.	ID=Dca33870.1.exon11;Parent=Dca33870.1
scaffold3473	Augustus	exon	12359	12575	.	-	.	ID=Dca33870.1.exon12;Parent=Dca33870.1