Carnation DB

Dca33901.1

Annotation

11-exons
f-1
sp|D7STK8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00640#unknown#0F0P0C
sp|B9RRW3_RICCO#Clathrin interactor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0798520#unknown#0F0P0C
Repeat List (scaffold348)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33901.1	1	554	554	62.45	554	60	4e-175
Target_name	Start	End	Length	Cov(%)
sp\|D7STK8_VITVI	44	608	608	92.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33901.1	1	554	554	58.3	554	56	9e-153
Target_name	Start	End	Length	Cov(%)
AT5G11710.1	1	560	560	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold348	Augustus	mRNA	36125	42706	.	+	.	ID=Dca33901.1;Parent=Dca33901
scaffold348	Augustus	exon	36125	36165	.	+	.	ID=Dca33901.1.exon1;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	36276	36327	.	+	.	ID=Dca33901.1.exon2;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	37235	37314	.	+	.	ID=Dca33901.1.exon3;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	37412	37490	.	+	.	ID=Dca33901.1.exon4;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	37584	37667	.	+	.	ID=Dca33901.1.exon5;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	37772	37917	.	+	.	ID=Dca33901.1.exon6;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	38009	38227	.	+	.	ID=Dca33901.1.exon7;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	38841	38989	.	+	.	ID=Dca33901.1.exon8;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	40327	40529	.	+	.	ID=Dca33901.1.exon9;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	41475	41853	.	+	.	ID=Dca33901.1.exon10;Parent=Dca33901.1
scaffold348	Augus-PASA	exon	42474	42706	.	+	.	ID=Dca33901.1.exon11;Parent=Dca33901.1