Dca33921.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold3480)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33921.1 |
72 |
704 |
814 |
33.9 |
633 |
38 |
8e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
727 |
1717 |
41.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33921.1 |
516 |
608 |
814 |
3.8 |
93 |
34 |
5e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3480 |
Augustus |
mRNA |
29026 |
33094 |
. |
+ |
. |
ID=Dca33921.1;Parent=Dca33921 |
| scaffold3480 |
Augustus |
exon |
29026 |
30419 |
. |
+ |
. |
ID=Dca33921.1.exon1;Parent=Dca33921.1 |
| scaffold3480 |
Augustus |
exon |
30498 |
30929 |
. |
+ |
. |
ID=Dca33921.1.exon2;Parent=Dca33921.1 |
| scaffold3480 |
Augustus |
exon |
32476 |
33094 |
. |
+ |
. |
ID=Dca33921.1.exon3;Parent=Dca33921.1 |
