Carnation DB

Dca33993.1

Annotation

8-exons
f-1
sp|E0CPG0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g13310#GO:0005525;GO:0003924;GO:0000287#3F0P0C
Os03t0799700-01 GTP1/OBG subdomain containing protein.
Repeat List (scaffold349)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33993.1	18	458	465	62.36	441	58	2e-146
Target_name	Start	End	Length	Cov(%)
sp\|E0CPG0_VITVI	11	508	509	97.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33993.1	352	462	465	8.38	111	36	2e-08
Target_name	Start	End	Length	Cov(%)
Os03t0799700-01	408	502	505	18.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold349	Augustus	mRNA	180155	186490	.	+	.	ID=Dca33993.1;Parent=Dca33993
scaffold349	Augustus	exon	180155	180279	.	+	.	ID=Dca33993.1.exon1;Parent=Dca33993.1
scaffold349	Augustus	exon	181018	181499	.	+	.	ID=Dca33993.1.exon2;Parent=Dca33993.1
scaffold349	Augustus	exon	181730	181821	.	+	.	ID=Dca33993.1.exon3;Parent=Dca33993.1
scaffold349	Augustus	exon	183208	183291	.	+	.	ID=Dca33993.1.exon4;Parent=Dca33993.1
scaffold349	Augustus	exon	183510	183587	.	+	.	ID=Dca33993.1.exon5;Parent=Dca33993.1
scaffold349	Augustus	exon	183797	183997	.	+	.	ID=Dca33993.1.exon6;Parent=Dca33993.1
scaffold349	Augustus	exon	185110	185351	.	+	.	ID=Dca33993.1.exon7;Parent=Dca33993.1
scaffold349	Augustus	exon	186397	186490	.	+	.	ID=Dca33993.1.exon8;Parent=Dca33993.1