Carnation DB

Dca34006.1

Annotation

5-exons
f-1
sp|B9SE20_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1482450#GO:0043531;GO:0006952#1F1P0C
sp|B9SE18_RICCO#Disease resistance protein RPP8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1482430#GO:0043531;GO:0004721;GO:0006952#2F1P0C
Repeat List (scaffold3491)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34006.1	189	996	1050	28.85	808	33	6e-105
Target_name	Start	End	Length	Cov(%)
sp\|B9SE20_RICCO	45	950	985	91.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34006.1	189	1007	1050	25.52	819	31	9e-85
Target_name	Start	End	Length	Cov(%)
AT1G59780.1	50	879	906	91.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3491	Augustus	mRNA	27154	33445	.	+	.	ID=Dca34006.1;Parent=Dca34006
scaffold3491	Augustus	exon	27154	27625	.	+	.	ID=Dca34006.1.exon1;Parent=Dca34006.1
scaffold3491	Augustus	exon	30235	30906	.	+	.	ID=Dca34006.1.exon2;Parent=Dca34006.1
scaffold3491	Augustus	exon	31046	31970	.	+	.	ID=Dca34006.1.exon3;Parent=Dca34006.1
scaffold3491	Augustus	exon	32226	32826	.	+	.	ID=Dca34006.1.exon4;Parent=Dca34006.1
scaffold3491	Augustus	exon	32963	33445	.	+	.	ID=Dca34006.1.exon5;Parent=Dca34006.1