Carnation DB

Dca34114.1

Annotation

7-exons
f-1
sp|B9H9T2_POPTR#ABC transporter family, cholesterol/phospholipid flippase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PtrAOH1#GO:0005524;GO:0016887#2F0P0C
Repeat List (scaffold3502)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34114.1	9	143	311	18.32	135	43	2e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9H9T2_POPTR	684	815	1891	6.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34114.1	19	131	311	16.72	113	46	1e-20
Target_name	Start	End	Length	Cov(%)
AT2G41700.1	683	794	1882	5.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3502	Augustus	mRNA	4372	6976	.	-	.	ID=Dca34114.1;Parent=Dca34114
scaffold3502	Augustus	exon	4372	4453	.	-	.	ID=Dca34114.1.exon1;Parent=Dca34114.1
scaffold3502	Augustus	exon	4546	4604	.	-	.	ID=Dca34114.1.exon2;Parent=Dca34114.1
scaffold3502	Augustus	exon	4917	5050	.	-	.	ID=Dca34114.1.exon3;Parent=Dca34114.1
scaffold3502	Augustus	exon	5525	5825	.	-	.	ID=Dca34114.1.exon4;Parent=Dca34114.1
scaffold3502	Augustus	exon	5952	6029	.	-	.	ID=Dca34114.1.exon5;Parent=Dca34114.1
scaffold3502	Augustus	exon	6106	6242	.	-	.	ID=Dca34114.1.exon6;Parent=Dca34114.1
scaffold3502	Augustus	exon	6832	6976	.	-	.	ID=Dca34114.1.exon7;Parent=Dca34114.1