Dca34316.1
Annotation
- 3-exons
- f-1186
- sp|Q9LRU8_ARATH#Non-LTR retroelement reverse transcriptase-like protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3533)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34316.1 |
3 |
353 |
361 |
38.5 |
351 |
39 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LRU8_ARATH |
166 |
521 |
893 |
39.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34316.1 |
2 |
346 |
361 |
32.96 |
345 |
34 |
4e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
251 |
597 |
626 |
55.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3533 |
Augustus |
mRNA |
10419 |
13146 |
. |
- |
. |
ID=Dca34316.1;Parent=Dca34316 |
| scaffold3533 |
Augustus |
exon |
10419 |
11700 |
. |
- |
. |
ID=Dca34316.1.exon1;Parent=Dca34316.1 |
| scaffold3533 |
Augustus |
exon |
11975 |
12939 |
. |
- |
. |
ID=Dca34316.1.exon2;Parent=Dca34316.1 |
| scaffold3533 |
Augustus |
exon |
13123 |
13146 |
. |
- |
. |
ID=Dca34316.1.exon3;Parent=Dca34316.1 |
