Carnation DB

Dca34319.1

Annotation

8-exons
f-1
sp|F6HLF3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g07090#GO:0016020;GO:0003824#1F0P1C
sp|B9SYU5_RICCO#Sphingosine-1-phosphate phosphohydrolase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0041070#GO:0016020;GO:0016787#1F0P1C
Repeat List (scaffold3533)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34319.1	1	408	408	70.58	408	71	6e-177
Target_name	Start	End	Length	Cov(%)
sp\|F6HLF3_VITVI	1	407	407	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34319.1	1	408	408	63.97	408	64	1e-158
Target_name	Start	End	Length	Cov(%)
AT3G58490.1	9	416	416	98.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3533	Augus-PASA	mRNA	18983	23389	.	-	.	ID=Dca34319.1;Parent=Dca34319
scaffold3533	Augus-PASA	exon	18983	19396	.	-	.	ID=Dca34319.1.exon1;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	19509	19624	.	-	.	ID=Dca34319.1.exon2;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	20685	20813	.	-	.	ID=Dca34319.1.exon3;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	20910	21013	.	-	.	ID=Dca34319.1.exon4;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	22222	22352	.	-	.	ID=Dca34319.1.exon5;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	22452	22526	.	-	.	ID=Dca34319.1.exon6;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	22770	22865	.	-	.	ID=Dca34319.1.exon7;Parent=Dca34319.1
scaffold3533	Augus-PASA	exon	23228	23389	.	-	.	ID=Dca34319.1.exon8;Parent=Dca34319.1