Dca34341.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold3538)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34341.1 |
8 |
593 |
626 |
36.58 |
586 |
38 |
3e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
180 |
796 |
1114 |
55.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34341.1 |
3 |
593 |
626 |
29.87 |
591 |
30 |
3e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
99 |
707 |
857 |
71.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3538 |
Augustus |
mRNA |
14730 |
18996 |
. |
- |
. |
ID=Dca34341.1;Parent=Dca34341 |
| scaffold3538 |
Augustus |
exon |
14730 |
14830 |
. |
- |
. |
ID=Dca34341.1.exon1;Parent=Dca34341.1 |
| scaffold3538 |
Augustus |
exon |
17124 |
18419 |
. |
- |
. |
ID=Dca34341.1.exon2;Parent=Dca34341.1 |
| scaffold3538 |
Augustus |
exon |
18513 |
18996 |
. |
- |
. |
ID=Dca34341.1.exon3;Parent=Dca34341.1 |
