Dca34399.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3547)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34399.1 |
1 |
175 |
177 |
59.32 |
175 |
49 |
8e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1098 |
1313 |
1313 |
16.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34399.1 |
4 |
173 |
177 |
34.46 |
170 |
30 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1213 |
1422 |
1428 |
14.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3547 |
Augustus |
mRNA |
28554 |
29207 |
. |
+ |
. |
ID=Dca34399.1;Parent=Dca34399 |
| scaffold3547 |
Augustus |
exon |
28554 |
28796 |
. |
+ |
. |
ID=Dca34399.1.exon1;Parent=Dca34399.1 |
| scaffold3547 |
Augustus |
exon |
28917 |
29207 |
. |
+ |
. |
ID=Dca34399.1.exon2;Parent=Dca34399.1 |
