Carnation DB

Dca34427.1

Annotation

7-exons
f-1
sp|C6SY13_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0016021#0F0P1C
AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr4:2227963-2229226 REVERSE LENGTH=190
Repeat List (scaffold355)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34427.1	3	185	186	66.66	183	68	2e-74
Target_name	Start	End	Length	Cov(%)
sp\|C6SY13_SOYBN	2	184	185	98.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34427.1	7	181	186	62.36	175	67	8e-68
Target_name	Start	End	Length	Cov(%)
AT4G04470.1	8	182	190	92.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold355	Augus-PASA	mRNA	67817	70439	.	+	.	ID=Dca34427.1;Parent=Dca34427
scaffold355	Augus-PASA	exon	67817	67891	.	+	.	ID=Dca34427.1.exon1;Parent=Dca34427.1
scaffold355	Augus-PASA	exon	68225	68323	.	+	.	ID=Dca34427.1.exon2;Parent=Dca34427.1
scaffold355	Augus-PASA	exon	69282	69383	.	+	.	ID=Dca34427.1.exon3;Parent=Dca34427.1
scaffold355	Augus-PASA	exon	69529	69604	.	+	.	ID=Dca34427.1.exon4;Parent=Dca34427.1
scaffold355	Augus-PASA	exon	70033	70103	.	+	.	ID=Dca34427.1.exon5;Parent=Dca34427.1
scaffold355	Augus-PASA	exon	70199	70284	.	+	.	ID=Dca34427.1.exon6;Parent=Dca34427.1
scaffold355	Augus-PASA	exon	70388	70439	.	+	.	ID=Dca34427.1.exon7;Parent=Dca34427.1