Carnation DB

Dca3448.1

Annotation

5-exons
f-1
sp|B9RAQ1_RICCO#Protein binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507810#GO:0005634;GO:0004402;GO:0003712;GO:0008270;GO:0006355#3F1P1C
Repeat List (scaffold1122)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3448.1	4	344	360	58.88	341	63	1e-126
Target_name	Start	End	Length	Cov(%)
sp\|B9RAQ1_RICCO	7	346	363	93.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3448.1	16	336	360	52.5	321	57	1e-100
Target_name	Start	End	Length	Cov(%)
AT3G48360.1	18	350	364	91.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1122	Augus-PASA	mRNA	11111	17142	.	+	.	ID=Dca3448.1;Parent=Dca3448
scaffold1122	Augus-PASA	exon	11111	11260	.	+	.	ID=Dca3448.1.exon1;Parent=Dca3448.1
scaffold1122	Augus-PASA	exon	11674	11810	.	+	.	ID=Dca3448.1.exon2;Parent=Dca3448.1
scaffold1122	Augus-PASA	exon	14018	14321	.	+	.	ID=Dca3448.1.exon3;Parent=Dca3448.1
scaffold1122	Augustus	exon	15283	15599	.	+	.	ID=Dca3448.1.exon4;Parent=Dca3448.1
scaffold1122	Augustus	exon	16968	17142	.	+	.	ID=Dca3448.1.exon5;Parent=Dca3448.1