Carnation DB

Dca34496.1

Annotation

9-exons
f-1
sp|B9SZP1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0005420#GO:0008270#1F0P0C
AT2G39810.1 | Symbols: HOS1 | ubiquitin-protein ligases | chr2:16612941-16617802 FORWARD LENGTH=927
Repeat List (scaffold356)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34496.1	12	884	884	52.6	873	49	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SZP1_RICCO	22	968	968	97.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34496.1	7	856	884	47.62	850	46	0
Target_name	Start	End	Length	Cov(%)
AT2G39810.1	7	907	927	97.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold356	Augustus	mRNA	74898	83338	.	-	.	ID=Dca34496.1;Parent=Dca34496
scaffold356	Augustus	exon	74898	75072	.	-	.	ID=Dca34496.1.exon1;Parent=Dca34496.1
scaffold356	Augustus	exon	75609	76279	.	-	.	ID=Dca34496.1.exon2;Parent=Dca34496.1
scaffold356	Augustus	exon	76691	76780	.	-	.	ID=Dca34496.1.exon3;Parent=Dca34496.1
scaffold356	Augustus	exon	78007	78501	.	-	.	ID=Dca34496.1.exon4;Parent=Dca34496.1
scaffold356	Augustus	exon	79120	79284	.	-	.	ID=Dca34496.1.exon5;Parent=Dca34496.1
scaffold356	Augustus	exon	79372	79779	.	-	.	ID=Dca34496.1.exon6;Parent=Dca34496.1
scaffold356	Augustus	exon	80043	80218	.	-	.	ID=Dca34496.1.exon7;Parent=Dca34496.1
scaffold356	Augustus	exon	80799	81189	.	-	.	ID=Dca34496.1.exon8;Parent=Dca34496.1
scaffold356	Augustus	exon	83255	83338	.	-	.	ID=Dca34496.1.exon9;Parent=Dca34496.1