Carnation DB

Dca34605.1

Annotation

5-exons
f-1
sp|B9HPA3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_768134#GO:0005524;GO:0004672#2F0P0C
AT5G59010.1 | Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr5:23820578-23823099 REVERSE LENGTH=489
Repeat List (scaffold35747)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34605.1	1	182	274	54.74	182	83	2e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9HPA3_POPTR	253	434	475	38.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34605.1	1	182	274	54.01	182	82	5e-87
Target_name	Start	End	Length	Cov(%)
AT5G59010.1	263	444	489	37.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold35747	Augustus	mRNA	192	5322	.	-	.	ID=Dca34605.1;Parent=Dca34605
scaffold35747	Augustus	exon	192	470	.	-	.	ID=Dca34605.1.exon1;Parent=Dca34605.1
scaffold35747	Augustus	exon	4450	4560	.	-	.	ID=Dca34605.1.exon2;Parent=Dca34605.1
scaffold35747	Augustus	exon	4675	4788	.	-	.	ID=Dca34605.1.exon3;Parent=Dca34605.1
scaffold35747	Augustus	exon	4910	5074	.	-	.	ID=Dca34605.1.exon4;Parent=Dca34605.1
scaffold35747	Augustus	exon	5167	5322	.	-	.	ID=Dca34605.1.exon5;Parent=Dca34605.1