Dca3501.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold11245)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3501.1 |
2 |
494 |
494 |
42.1 |
493 |
40 |
1e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
149 |
643 |
1501 |
32.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3501.1 |
183 |
494 |
494 |
19.23 |
312 |
30 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
11 |
332 |
707 |
45.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11245 |
Augustus |
mRNA |
1 |
1595 |
. |
+ |
. |
ID=Dca3501.1;Parent=Dca3501 |
| scaffold11245 |
Augustus |
exon |
1 |
739 |
. |
+ |
. |
ID=Dca3501.1.exon1;Parent=Dca3501.1 |
| scaffold11245 |
Augustus |
exon |
850 |
1595 |
. |
+ |
. |
ID=Dca3501.1.exon2;Parent=Dca3501.1 |
