Carnation DB

Dca35160.1

Annotation

6-exons
f-1
sp|D7SUI9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g04350#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
Os01t0179200-01 Syntaxin, N-terminal domain containing protein.
Repeat List (scaffold3640)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35160.1	1	299	305	78.03	299	78	2e-115
Target_name	Start	End	Length	Cov(%)
sp\|D7SUI9_VITVI	3	308	340	90

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35160.1	2	299	305	67.86	298	66	2e-106
Target_name	Start	End	Length	Cov(%)
Os01t0179200-01	5	312	345	89.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3640	Augustus	mRNA	19447	25742	.	+	.	ID=Dca35160.1;Parent=Dca35160
scaffold3640	Augustus	exon	19447	19666	.	+	.	ID=Dca35160.1.exon1;Parent=Dca35160.1
scaffold3640	Augustus	exon	21988	22238	.	+	.	ID=Dca35160.1.exon2;Parent=Dca35160.1
scaffold3640	Augustus	exon	22325	22497	.	+	.	ID=Dca35160.1.exon3;Parent=Dca35160.1
scaffold3640	Augustus	exon	24606	24797	.	+	.	ID=Dca35160.1.exon4;Parent=Dca35160.1
scaffold3640	Augustus	exon	25442	25504	.	+	.	ID=Dca35160.1.exon5;Parent=Dca35160.1
scaffold3640	Augustus	exon	25724	25742	.	+	.	ID=Dca35160.1.exon6;Parent=Dca35160.1