Carnation DB

Dca35188.1

Annotation

7-exons
f-1
sp|D7TL48_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g01310#unknown#0F0P0C
sp|B9SI82_RICCO#Membrin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1321740#unknown#0F0P0C
Repeat List (scaffold3647)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35188.1	188	410	410	38.53	223	71	8e-90
Target_name	Start	End	Length	Cov(%)
sp\|D7TL48_VITVI	3	224	224	99.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35188.1	182	408	410	35.85	227	65	2e-80
Target_name	Start	End	Length	Cov(%)
AT2G36900.1	3	223	225	98.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3647	Augustus	mRNA	14484	25903	.	+	.	ID=Dca35188.1;Parent=Dca35188
scaffold3647	Augustus	exon	14484	14838	.	+	.	ID=Dca35188.1.exon1;Parent=Dca35188.1
scaffold3647	Augustus	exon	19587	19674	.	+	.	ID=Dca35188.1.exon2;Parent=Dca35188.1
scaffold3647	Augus-PASA	exon	22361	22425	.	+	.	ID=Dca35188.1.exon3;Parent=Dca35188.1
scaffold3647	Augus-PASA	exon	22936	23227	.	+	.	ID=Dca35188.1.exon4;Parent=Dca35188.1
scaffold3647	Augus-PASA	exon	24249	24369	.	+	.	ID=Dca35188.1.exon5;Parent=Dca35188.1
scaffold3647	Augustus	exon	25092	25241	.	+	.	ID=Dca35188.1.exon6;Parent=Dca35188.1
scaffold3647	Augustus	exon	25742	25903	.	+	.	ID=Dca35188.1.exon7;Parent=Dca35188.1