Carnation DB

Dca35214.1

Annotation

9-exons
f-1
sp|F6HM45_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g00420#GO:0005634;GO:0003677;GO:0006355;GO:0009725;GO:0006351#1F3P1C
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related | chr2:14325444-14328613 REVERSE LENGTH=608
Repeat List (scaffold365)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35214.1	1	567	577	57.36	567	53	9e-161
Target_name	Start	End	Length	Cov(%)
sp\|F6HM45_VITVI	104	729	779	80.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35214.1	1	413	577	39.68	413	56	4e-122
Target_name	Start	End	Length	Cov(%)
AT2G33860.1	109	501	608	64.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold365	Augus-PASA	mRNA	143182	146849	.	-	.	ID=Dca35214.1;Parent=Dca35214
scaffold365	Augus-PASA	exon	143182	143975	.	-	.	ID=Dca35214.1.exon1;Parent=Dca35214.1
scaffold365	Augus-PASA	exon	144074	144233	.	-	.	ID=Dca35214.1.exon2;Parent=Dca35214.1
scaffold365	Augus-PASA	exon	144574	144649	.	-	.	ID=Dca35214.1.exon3;Parent=Dca35214.1
scaffold365	Augus-PASA	exon	144730	144849	.	-	.	ID=Dca35214.1.exon4;Parent=Dca35214.1
scaffold365	Augus-PASA	exon	144989	145153	.	-	.	ID=Dca35214.1.exon5;Parent=Dca35214.1
scaffold365	Augustus	exon	145237	145327	.	-	.	ID=Dca35214.1.exon6;Parent=Dca35214.1
scaffold365	Augustus	exon	146018	146102	.	-	.	ID=Dca35214.1.exon7;Parent=Dca35214.1
scaffold365	Augustus	exon	146242	146427	.	-	.	ID=Dca35214.1.exon8;Parent=Dca35214.1
scaffold365	Augustus	exon	146793	146849	.	-	.	ID=Dca35214.1.exon9;Parent=Dca35214.1