Dca35228.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3653)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35228.1 |
8 |
398 |
398 |
62.31 |
391 |
56 |
1e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
332 |
769 |
964 |
45.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35228.1 |
97 |
398 |
398 |
27.88 |
302 |
33 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
1230 |
1428 |
23.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3653 |
Augustus |
mRNA |
1055 |
2369 |
. |
- |
. |
ID=Dca35228.1;Parent=Dca35228 |
| scaffold3653 |
Augustus |
exon |
1055 |
1527 |
. |
- |
. |
ID=Dca35228.1.exon1;Parent=Dca35228.1 |
| scaffold3653 |
Augustus |
exon |
1646 |
2369 |
. |
- |
. |
ID=Dca35228.1.exon2;Parent=Dca35228.1 |
