Carnation DB

Dca35340.1

Annotation

11-exons
f-1
sp|B9HRH2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721896#GO:0016020;GO:0015297;GO:0015238#2F0P1C
sp|B9RHB8_RICCO#DNA-damage-inducible protein f, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1449560#GO:0016020;GO:0015297;GO:0015238#2F0P1C
Repeat List (scaffold367)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35340.1	3	440	442	63.57	438	60	1e-149
Target_name	Start	End	Length	Cov(%)
sp\|B9HRH2_POPTR	17	457	459	96.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35340.1	1	434	442	60.4	434	57	9e-141
Target_name	Start	End	Length	Cov(%)
AT2G21340.1	116	552	559	78.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold367	Augustus	mRNA	146137	150262	.	+	.	ID=Dca35340.1;Parent=Dca35340
scaffold367	Augustus	exon	146137	146257	.	+	.	ID=Dca35340.1.exon1;Parent=Dca35340.1
scaffold367	Augustus	exon	146661	146755	.	+	.	ID=Dca35340.1.exon2;Parent=Dca35340.1
scaffold367	Augustus	exon	146991	147099	.	+	.	ID=Dca35340.1.exon3;Parent=Dca35340.1
scaffold367	Augustus	exon	147558	147613	.	+	.	ID=Dca35340.1.exon4;Parent=Dca35340.1
scaffold367	Augustus	exon	147718	147773	.	+	.	ID=Dca35340.1.exon5;Parent=Dca35340.1
scaffold367	Augustus	exon	147938	148076	.	+	.	ID=Dca35340.1.exon6;Parent=Dca35340.1
scaffold367	Augustus	exon	148162	148299	.	+	.	ID=Dca35340.1.exon7;Parent=Dca35340.1
scaffold367	Augustus	exon	148374	148442	.	+	.	ID=Dca35340.1.exon8;Parent=Dca35340.1
scaffold367	Augustus	exon	149021	149149	.	+	.	ID=Dca35340.1.exon9;Parent=Dca35340.1
scaffold367	Augustus	exon	149294	149371	.	+	.	ID=Dca35340.1.exon10;Parent=Dca35340.1
scaffold367	Augustus	exon	149924	150262	.	+	.	ID=Dca35340.1.exon11;Parent=Dca35340.1