Dca3548.1
Annotation
- 2-exons
- f-1
- sp|A5APP5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032622#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1127)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3548.1 |
1 |
519 |
519 |
66.08 |
519 |
59 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5APP5_VITVI |
6 |
551 |
1250 |
43.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3548.1 |
287 |
519 |
519 |
18.11 |
233 |
40 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
497 |
730 |
1428 |
16.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1127 |
Augustus |
mRNA |
47083 |
48983 |
. |
+ |
. |
ID=Dca3548.1;Parent=Dca3548 |
| scaffold1127 |
Augustus |
exon |
47083 |
47912 |
. |
+ |
. |
ID=Dca3548.1.exon1;Parent=Dca3548.1 |
| scaffold1127 |
Augustus |
exon |
48254 |
48983 |
. |
+ |
. |
ID=Dca3548.1.exon2;Parent=Dca3548.1 |
