Carnation DB

Dca35497.1

Annotation

7-exons
f-1
sp|A9PHV8_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0004588;GO:0004590;GO:0006207;GO:0044205#2F2P0C
AT3G54470.1 | Symbols: | uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) | chr3:20168285-20170245 REVERSE LENGTH=476
Repeat List (scaffold3691)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35497.1	12	485	486	73.45	474	76	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PHV8_POPTR	3	475	475	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35497.1	14	486	486	73.66	473	76	0
Target_name	Start	End	Length	Cov(%)
AT3G54470.1	5	476	476	99.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3691	Augustus	mRNA	24803	27717	.	-	.	ID=Dca35497.1;Parent=Dca35497
scaffold3691	Augustus	exon	24803	24934	.	-	.	ID=Dca35497.1.exon1;Parent=Dca35497.1
scaffold3691	Augustus	exon	25223	25477	.	-	.	ID=Dca35497.1.exon2;Parent=Dca35497.1
scaffold3691	Augustus	exon	25557	25644	.	-	.	ID=Dca35497.1.exon3;Parent=Dca35497.1
scaffold3691	Augustus	exon	25735	25817	.	-	.	ID=Dca35497.1.exon4;Parent=Dca35497.1
scaffold3691	Augustus	exon	25950	26033	.	-	.	ID=Dca35497.1.exon5;Parent=Dca35497.1
scaffold3691	Augustus	exon	26316	26652	.	-	.	ID=Dca35497.1.exon6;Parent=Dca35497.1
scaffold3691	Augus-PASA	exon	27236	27717	.	-	.	ID=Dca35497.1.exon7;Parent=Dca35497.1