Dca35588.1
Annotation
- 3-exons
- f-1
- sp|A5BC00_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_007944#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold3702)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35588.1 |
80 |
465 |
484 |
37.6 |
386 |
46 |
5e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BC00_VITVI |
899 |
1299 |
1884 |
21.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35588.1 |
24 |
279 |
484 |
19.21 |
256 |
36 |
1e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
814 |
1068 |
1401 |
18.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3702 |
Augustus |
mRNA |
23771 |
27308 |
. |
+ |
. |
ID=Dca35588.1;Parent=Dca35588 |
| scaffold3702 |
Augustus |
exon |
23771 |
23839 |
. |
+ |
. |
ID=Dca35588.1.exon1;Parent=Dca35588.1 |
| scaffold3702 |
Augustus |
exon |
25509 |
26206 |
. |
+ |
. |
ID=Dca35588.1.exon2;Parent=Dca35588.1 |
| scaffold3702 |
Augustus |
exon |
26621 |
27308 |
. |
+ |
. |
ID=Dca35588.1.exon3;Parent=Dca35588.1 |
