Carnation DB

Dca356.1

Annotation

5-exons
f-1
sp|B9GPY9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_409801#unknown#0F0P0C
Repeat List (scaffold1003)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca356.1	4	145	166	60.24	142	71	2e-55
Target_name	Start	End	Length	Cov(%)
sp\|B9GPY9_POPTR	178	318	622	22.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca356.1	4	145	166	57.83	142	68	4e-51
Target_name	Start	End	Length	Cov(%)
AT1G01770.1	195	336	632	22.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1003	Augustus	mRNA	57175	58410	.	-	.	ID=Dca356.1;Parent=Dca356
scaffold1003	Augustus	exon	57175	57240	.	-	.	ID=Dca356.1.exon1;Parent=Dca356.1
scaffold1003	Augustus	exon	57501	57620	.	-	.	ID=Dca356.1.exon2;Parent=Dca356.1
scaffold1003	Augustus	exon	57700	57890	.	-	.	ID=Dca356.1.exon3;Parent=Dca356.1
scaffold1003	Augustus	exon	57974	58088	.	-	.	ID=Dca356.1.exon4;Parent=Dca356.1
scaffold1003	Augustus	exon	58402	58410	.	-	.	ID=Dca356.1.exon5;Parent=Dca356.1