Dca35624.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold371)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35624.1 |
1 |
76 |
160 |
31.87 |
76 |
68 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
1034 |
1109 |
1333 |
5.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35624.1 |
1 |
77 |
160 |
18.12 |
77 |
38 |
4e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1129 |
1205 |
1428 |
5.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold371 |
Augustus |
mRNA |
47378 |
48199 |
. |
- |
. |
ID=Dca35624.1;Parent=Dca35624 |
| scaffold371 |
Augustus |
exon |
47378 |
47630 |
. |
- |
. |
ID=Dca35624.1.exon1;Parent=Dca35624.1 |
| scaffold371 |
Augustus |
exon |
47970 |
48199 |
. |
- |
. |
ID=Dca35624.1.exon2;Parent=Dca35624.1 |
