Carnation DB

Dca35632.1

Annotation

5-exons
f-1
sp|B9RKT8_RICCO#DNA mismatch repair protein MSH6-2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1053350#GO:0005524;GO:0030983;GO:0006298#2F1P0C
Repeat List (scaffold371)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35632.1	2	429	436	70.87	428	72	4e-179
Target_name	Start	End	Length	Cov(%)
sp\|B9RKT8_RICCO	654	1087	1089	39.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35632.1	2	429	436	66.51	428	67	2e-170
Target_name	Start	End	Length	Cov(%)
AT3G24495.1	668	1105	1109	39.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold371	Augustus	mRNA	116405	118994	.	-	.	ID=Dca35632.1;Parent=Dca35632
scaffold371	Augustus	exon	116405	116878	.	-	.	ID=Dca35632.1.exon1;Parent=Dca35632.1
scaffold371	Augustus	exon	117690	117817	.	-	.	ID=Dca35632.1.exon2;Parent=Dca35632.1
scaffold371	Augustus	exon	118067	118163	.	-	.	ID=Dca35632.1.exon3;Parent=Dca35632.1
scaffold371	Augustus	exon	118274	118684	.	-	.	ID=Dca35632.1.exon4;Parent=Dca35632.1
scaffold371	Augustus	exon	118794	118994	.	-	.	ID=Dca35632.1.exon5;Parent=Dca35632.1