Carnation DB

Dca3570.1

Annotation

9-exons
f-1
sp|B9N9I2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828609#unknown#0F0P0C
AT1G73390.1 | Symbols: | Endosomal targeting BRO1-like domain-containing protein | chr1:27591079-27594148 REVERSE LENGTH=419
Repeat List (scaffold1128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3570.1	1	345	345	79.42	345	80	7e-164
Target_name	Start	End	Length	Cov(%)
sp\|B9N9I2_POPTR	1	344	363	94.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3570.1	1	345	345	75.07	345	76	3e-158
Target_name	Start	End	Length	Cov(%)
AT1G73390.1	1	342	419	81.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1128	Augustus	mRNA	99288	107960	.	+	.	ID=Dca3570.1;Parent=Dca3570
scaffold1128	Augustus	exon	99288	99543	.	+	.	ID=Dca3570.1.exon1;Parent=Dca3570.1
scaffold1128	Augustus	exon	99805	99879	.	+	.	ID=Dca3570.1.exon2;Parent=Dca3570.1
scaffold1128	Augustus	exon	99994	100052	.	+	.	ID=Dca3570.1.exon3;Parent=Dca3570.1
scaffold1128	Augustus	exon	101106	101241	.	+	.	ID=Dca3570.1.exon4;Parent=Dca3570.1
scaffold1128	Augustus	exon	102535	102631	.	+	.	ID=Dca3570.1.exon5;Parent=Dca3570.1
scaffold1128	Augustus	exon	102730	102796	.	+	.	ID=Dca3570.1.exon6;Parent=Dca3570.1
scaffold1128	Augustus	exon	103561	103659	.	+	.	ID=Dca3570.1.exon7;Parent=Dca3570.1
scaffold1128	Augustus	exon	106150	106239	.	+	.	ID=Dca3570.1.exon8;Parent=Dca3570.1
scaffold1128	Augustus	exon	107802	107960	.	+	.	ID=Dca3570.1.exon9;Parent=Dca3570.1