Carnation DB

Dca35872.1

Annotation

5-exons
f-1
sp|A5C8K0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001808#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold3753)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35872.1	3	366	680	19.11	364	34	6e-44
Target_name	Start	End	Length	Cov(%)
sp\|A5C8K0_VITVI	14	390	1885	20

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35872.1	537	677	680	11.17	141	54	1e-38
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	909	1049	1401	10.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3753	Augustus	mRNA	29144	33683	.	+	.	ID=Dca35872.1;Parent=Dca35872
scaffold3753	Augustus	exon	29144	30253	.	+	.	ID=Dca35872.1.exon1;Parent=Dca35872.1
scaffold3753	Augustus	exon	31325	31477	.	+	.	ID=Dca35872.1.exon2;Parent=Dca35872.1
scaffold3753	Augustus	exon	32623	32763	.	+	.	ID=Dca35872.1.exon3;Parent=Dca35872.1
scaffold3753	Augustus	exon	32890	33068	.	+	.	ID=Dca35872.1.exon4;Parent=Dca35872.1
scaffold3753	Augustus	exon	33224	33683	.	+	.	ID=Dca35872.1.exon5;Parent=Dca35872.1